I hope it will become more excellent with plugins. And I think obsidian note system is much better. To be honest, Zettlr have similar features but dont have graph view. Zotero is best for our purpose because it open source, free, annotations have links ( which is very important feature, because after 2 year you want to read this article pdfs so by clicking the link in your permenant note and open the pdf) and betterbibtex addons which is ideal for reference insertion to the markdown files. By this way you learn more from your read past article also you dont need to read the same article again and again. After 2 or 3 year later you will have a great library to write. After all, print as pdf or word files.īest part of creating this annotation as a note is, you can easliy convert to them permenant or zettel notes ( my suggestion even this notes can be different color to recognize easily ). At the end stage manuscript, styling reference depending on journal with. And if it is possible with new obsdian version, insert reference through ( bibtext addon of zotero). Then while writing use this notes to develop ideas. It should be ideal to copy this excerpts ( with linked to pdf in zotero) paste to obsidian and make new notes for each pdf or may be for each annotations. And use this annotations to write new article. After reading finished, extract annotations from pdfs by the help of zotfile in Zotero. My planing workflow is collecting PDFs on zotero, annotate them on default pdf reader. Please Could you add some feature to use zotero like reference manager with Obsidian.
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